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ethanol precipitation  (Thermo Fisher)


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    Structured Review

    Thermo Fisher ethanol precipitation
    Ethanol Precipitation, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ethanol+precipitation/2+MERCAPTOETHANOL/pmc13120737-526-14-24
    Average 99 stars, based on 1 article reviews
    ethanol precipitation - by Bioz Stars, 2026-10
    99/100 stars

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    Related Articles

    Ethanol Precipitation:

    Article Title: Inflammatory Gene Expression Associates with Hepatitis B Virus cccDNA- but Not Integrant-Derived Transcripts in HBeAg Negative Disease
    Article Snippet: DNA was extracted by ethanol precipitation from the organic phase, following the manufacturer’s instruction (Thermo Fisher).

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression through Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: Subsequently, DNA was recovered by ethanol precipitation (1 μl 20 μg/μl Glycogen; #R0561, ThermoFisher Scientific, 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5X volume of the sample) and used as the template for qPCR.

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression Though Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: The agarose beads were retrieved by brief centrifugation, and the DNA-protein complexes were eluted in the elution buffer (50 mM Tris.HCl, pH 8.0, 1 mM EDTA pH 8.0, 1% SDS, 50 mM NaHCO3), followed by adding 200 mM NaCl and treatment with 0.1 μg/μl DNase- and protease-free RNase A (#EN0531, ThermoFisher Scientific) at 65oC overnight and then treatment with 0.2 μg/μl proteinase K (#MC5005, Promega, Madison, WI) at 42oC for 2 h. The input enzymes and remaining cellular proteins were removed by phenol-chloroform extraction, and the DNA was recovered by ethanol precipitation [1 μl 20 μg/μl Glycogen (#R0561, ThermoFisher Scientific), 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5 X volume of sample] and used as the template for qPCR.

    Article Title: Untangling a Gordian knot: the role of a GluCl3 I321T mutation in abamectin resistance in Tetranychus urticae.
    Article Snippet: The plasmids were linearized with NotI-HF restriction endonuclease (New England BioLabs Inc., Ipswich, MA, USA) followed by extraction using the phenol and chloroform method with ethanol precipitation.58 Capped mRNAs were generated using the mMESSAGEmMACHINE T7 transcription kit (Thermo Fischer Scientific, Waltham, MA, USA) according to manufacturer instructions.

    Article Title: SETDB1 fuels the lung cancer phenotype by modulating epigenome, 3D genome organization and chromatin mechanical properties.
    Article Snippet: After cross-link reversal, the DNA was purified by single phenol-chloroform extraction followed by ethanol precipitation with 20 g/ml glycogen (Thermo Scientific; Cat#: R0561) as the co-precipitator.

    Article Title: Epigenomic signatures of sarcomatoid differentiation to guide the treatment of renal cell carcinoma.
    Article Snippet: Subsequently, the beads were rinsed with TE buffer (Fisher Sci, cat# BP2473500), and resuspended and incubated in 100mL of DNA extraction buffer containing 0.1 M NaHCO3, 1% SDS and 0.6 mg/mL Proteinase K (Qiagen, cat#19131) and 0.4 mg/mL RNaseA (Thermo Fisher, cat#12091021) for 10 min for 37 C, for 1 h for 50 C, and for 90 min at 65 C. DNAwas purified through Phenol extraction (Invitrogen, cat# 15593031) and Ethanol precipitation was performedwith 3MNaOAc (Ambion, cat# AM9740) and glycogen (Ambion, cat# AM9510). cfChIP-seq libraries were prepared with ThruPLEX DNA-Seq Kit (Takara Bio, cat# R400675) following the manufacturer’s instructions.

    Article Title: Multi-site DMS probing reveals higher-order structure of RNA-protein complexes in living cells
    Article Snippet: Samples were then quenched with 10 volumes of 2-mercaptoethanol on ice and purified by ethanol precipitation. hTERT-RPE1 cells were maintained in DMEM-F12 with HEPES (Gibco) with 10% FBS (Gibco), 100 U/mL Pen/Strep (Gibco), 2 mM sodium pyruvate (Gibco), and MEM non-essential amino acids (Gibco) at 37 °C and 5% CO 2 .

    Article Title: Rapid, effective and low-cost purification of dideoxy-sequencing reactions by home-made magnetic beads suspension and magnetic separator.
    Article Snippet: Ethanol precipitation and BigDye XTerminator purification were conducted according to the manufacture’s protocols (Thermofisher).

    Real-time Polymerase Chain Reaction:

    Article Title: Inflammatory Gene Expression Associates with Hepatitis B Virus cccDNA- but Not Integrant-Derived Transcripts in HBeAg Negative Disease
    Article Snippet: DNA was extracted by ethanol precipitation from the organic phase, following the manufacturer’s instruction (Thermo Fisher).

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression through Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: Subsequently, DNA was recovered by ethanol precipitation (1 μl 20 μg/μl Glycogen; #R0561, ThermoFisher Scientific, 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5X volume of the sample) and used as the template for qPCR.

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression Though Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: The agarose beads were retrieved by brief centrifugation, and the DNA-protein complexes were eluted in the elution buffer (50 mM Tris.HCl, pH 8.0, 1 mM EDTA pH 8.0, 1% SDS, 50 mM NaHCO3), followed by adding 200 mM NaCl and treatment with 0.1 μg/μl DNase- and protease-free RNase A (#EN0531, ThermoFisher Scientific) at 65oC overnight and then treatment with 0.2 μg/μl proteinase K (#MC5005, Promega, Madison, WI) at 42oC for 2 h. The input enzymes and remaining cellular proteins were removed by phenol-chloroform extraction, and the DNA was recovered by ethanol precipitation [1 μl 20 μg/μl Glycogen (#R0561, ThermoFisher Scientific), 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5 X volume of sample] and used as the template for qPCR.

    Article Title: Untangling a Gordian knot: the role of a GluCl3 I321T mutation in abamectin resistance in Tetranychus urticae.
    Article Snippet: The plasmids were linearized with NotI-HF restriction endonuclease (New England BioLabs Inc., Ipswich, MA, USA) followed by extraction using the phenol and chloroform method with ethanol precipitation.58 Capped mRNAs were generated using the mMESSAGEmMACHINE T7 transcription kit (Thermo Fischer Scientific, Waltham, MA, USA) according to manufacturer instructions.

    Article Title: SETDB1 fuels the lung cancer phenotype by modulating epigenome, 3D genome organization and chromatin mechanical properties.
    Article Snippet: After cross-link reversal, the DNA was purified by single phenol-chloroform extraction followed by ethanol precipitation with 20 g/ml glycogen (Thermo Scientific; Cat#: R0561) as the co-precipitator.

    Article Title: Epigenomic signatures of sarcomatoid differentiation to guide the treatment of renal cell carcinoma.
    Article Snippet: Subsequently, the beads were rinsed with TE buffer (Fisher Sci, cat# BP2473500), and resuspended and incubated in 100mL of DNA extraction buffer containing 0.1 M NaHCO3, 1% SDS and 0.6 mg/mL Proteinase K (Qiagen, cat#19131) and 0.4 mg/mL RNaseA (Thermo Fisher, cat#12091021) for 10 min for 37 C, for 1 h for 50 C, and for 90 min at 65 C. DNAwas purified through Phenol extraction (Invitrogen, cat# 15593031) and Ethanol precipitation was performedwith 3MNaOAc (Ambion, cat# AM9740) and glycogen (Ambion, cat# AM9510). cfChIP-seq libraries were prepared with ThruPLEX DNA-Seq Kit (Takara Bio, cat# R400675) following the manufacturer’s instructions.

    Article Title: Multi-site DMS probing reveals higher-order structure of RNA-protein complexes in living cells
    Article Snippet: Samples were then quenched with 10 volumes of 2-mercaptoethanol on ice and purified by ethanol precipitation. hTERT-RPE1 cells were maintained in DMEM-F12 with HEPES (Gibco) with 10% FBS (Gibco), 100 U/mL Pen/Strep (Gibco), 2 mM sodium pyruvate (Gibco), and MEM non-essential amino acids (Gibco) at 37 °C and 5% CO 2 .

    Article Title: Rapid, effective and low-cost purification of dideoxy-sequencing reactions by home-made magnetic beads suspension and magnetic separator.
    Article Snippet: Ethanol precipitation and BigDye XTerminator purification were conducted according to the manufacture’s protocols (Thermofisher).

    Centrifugation:

    Article Title: Inflammatory Gene Expression Associates with Hepatitis B Virus cccDNA- but Not Integrant-Derived Transcripts in HBeAg Negative Disease
    Article Snippet: DNA was extracted by ethanol precipitation from the organic phase, following the manufacturer’s instruction (Thermo Fisher).

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression through Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: Subsequently, DNA was recovered by ethanol precipitation (1 μl 20 μg/μl Glycogen; #R0561, ThermoFisher Scientific, 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5X volume of the sample) and used as the template for qPCR.

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression Though Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: The agarose beads were retrieved by brief centrifugation, and the DNA-protein complexes were eluted in the elution buffer (50 mM Tris.HCl, pH 8.0, 1 mM EDTA pH 8.0, 1% SDS, 50 mM NaHCO3), followed by adding 200 mM NaCl and treatment with 0.1 μg/μl DNase- and protease-free RNase A (#EN0531, ThermoFisher Scientific) at 65oC overnight and then treatment with 0.2 μg/μl proteinase K (#MC5005, Promega, Madison, WI) at 42oC for 2 h. The input enzymes and remaining cellular proteins were removed by phenol-chloroform extraction, and the DNA was recovered by ethanol precipitation [1 μl 20 μg/μl Glycogen (#R0561, ThermoFisher Scientific), 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5 X volume of sample] and used as the template for qPCR.

    Article Title: Untangling a Gordian knot: the role of a GluCl3 I321T mutation in abamectin resistance in Tetranychus urticae.
    Article Snippet: The plasmids were linearized with NotI-HF restriction endonuclease (New England BioLabs Inc., Ipswich, MA, USA) followed by extraction using the phenol and chloroform method with ethanol precipitation.58 Capped mRNAs were generated using the mMESSAGEmMACHINE T7 transcription kit (Thermo Fischer Scientific, Waltham, MA, USA) according to manufacturer instructions.

    Article Title: SETDB1 fuels the lung cancer phenotype by modulating epigenome, 3D genome organization and chromatin mechanical properties.
    Article Snippet: After cross-link reversal, the DNA was purified by single phenol-chloroform extraction followed by ethanol precipitation with 20 g/ml glycogen (Thermo Scientific; Cat#: R0561) as the co-precipitator.

    Article Title: Epigenomic signatures of sarcomatoid differentiation to guide the treatment of renal cell carcinoma.
    Article Snippet: Subsequently, the beads were rinsed with TE buffer (Fisher Sci, cat# BP2473500), and resuspended and incubated in 100mL of DNA extraction buffer containing 0.1 M NaHCO3, 1% SDS and 0.6 mg/mL Proteinase K (Qiagen, cat#19131) and 0.4 mg/mL RNaseA (Thermo Fisher, cat#12091021) for 10 min for 37 C, for 1 h for 50 C, and for 90 min at 65 C. DNAwas purified through Phenol extraction (Invitrogen, cat# 15593031) and Ethanol precipitation was performedwith 3MNaOAc (Ambion, cat# AM9740) and glycogen (Ambion, cat# AM9510). cfChIP-seq libraries were prepared with ThruPLEX DNA-Seq Kit (Takara Bio, cat# R400675) following the manufacturer’s instructions.

    Article Title: Multi-site DMS probing reveals higher-order structure of RNA-protein complexes in living cells
    Article Snippet: Samples were then quenched with 10 volumes of 2-mercaptoethanol on ice and purified by ethanol precipitation. hTERT-RPE1 cells were maintained in DMEM-F12 with HEPES (Gibco) with 10% FBS (Gibco), 100 U/mL Pen/Strep (Gibco), 2 mM sodium pyruvate (Gibco), and MEM non-essential amino acids (Gibco) at 37 °C and 5% CO 2 .

    Article Title: Rapid, effective and low-cost purification of dideoxy-sequencing reactions by home-made magnetic beads suspension and magnetic separator.
    Article Snippet: Ethanol precipitation and BigDye XTerminator purification were conducted according to the manufacture’s protocols (Thermofisher).

    Extraction:

    Article Title: Inflammatory Gene Expression Associates with Hepatitis B Virus cccDNA- but Not Integrant-Derived Transcripts in HBeAg Negative Disease
    Article Snippet: DNA was extracted by ethanol precipitation from the organic phase, following the manufacturer’s instruction (Thermo Fisher).

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression through Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: Subsequently, DNA was recovered by ethanol precipitation (1 μl 20 μg/μl Glycogen; #R0561, ThermoFisher Scientific, 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5X volume of the sample) and used as the template for qPCR.

    Article Title: Metformin Treatment Leads to Increased HIV Transcription and Gene Expression Though Increased CREB Phosphorylation and Recruitment to the HIV LTR Promoter
    Article Snippet: The agarose beads were retrieved by brief centrifugation, and the DNA-protein complexes were eluted in the elution buffer (50 mM Tris.HCl, pH 8.0, 1 mM EDTA pH 8.0, 1% SDS, 50 mM NaHCO3), followed by adding 200 mM NaCl and treatment with 0.1 μg/μl DNase- and protease-free RNase A (#EN0531, ThermoFisher Scientific) at 65oC overnight and then treatment with 0.2 μg/μl proteinase K (#MC5005, Promega, Madison, WI) at 42oC for 2 h. The input enzymes and remaining cellular proteins were removed by phenol-chloroform extraction, and the DNA was recovered by ethanol precipitation [1 μl 20 μg/μl Glycogen (#R0561, ThermoFisher Scientific), 7.5 M NH4OAc in the amount of 0.5 X volume of sample and 100% ethanol in the amount of 2.5 X volume of sample] and used as the template for qPCR.

    Article Title: Untangling a Gordian knot: the role of a GluCl3 I321T mutation in abamectin resistance in Tetranychus urticae.
    Article Snippet: The plasmids were linearized with NotI-HF restriction endonuclease (New England BioLabs Inc., Ipswich, MA, USA) followed by extraction using the phenol and chloroform method with ethanol precipitation.58 Capped mRNAs were generated using the mMESSAGEmMACHINE T7 transcription kit (Thermo Fischer Scientific, Waltham, MA, USA) according to manufacturer instructions.

    Article Title: SETDB1 fuels the lung cancer phenotype by modulating epigenome, 3D genome organization and chromatin mechanical properties.
    Article Snippet: After cross-link reversal, the DNA was purified by single phenol-chloroform extraction followed by ethanol precipitation with 20 g/ml glycogen (Thermo Scientific; Cat#: R0561) as the co-precipitator.

    Article Title: Epigenomic signatures of sarcomatoid differentiation to guide the treatment of renal cell carcinoma.
    Article Snippet: Subsequently, the beads were rinsed with TE buffer (Fisher Sci, cat# BP2473500), and resuspended and incubated in 100mL of DNA extraction buffer containing 0.1 M NaHCO3, 1% SDS and 0.6 mg/mL Proteinase K (Qiagen, cat#19131) and 0.4 mg/mL RNaseA (Thermo Fisher, cat#12091021) for 10 min for 37 C, for 1 h for 50 C, and for 90 min at 65 C. DNAwas purified through Phenol extraction (Invitrogen, cat# 15593031) and Ethanol precipitation was performedwith 3MNaOAc (Ambion, cat# AM9740) and glycogen (Ambion, cat# AM9510). cfChIP-seq libraries were prepared with ThruPLEX DNA-Seq Kit (Takara Bio, cat# R400675) following the manufacturer’s instructions.

    Article Title: Multi-site DMS probing reveals higher-order structure of RNA-protein complexes in living cells
    Article Snippet: Samples were then quenched with 10 volumes of 2-mercaptoethanol on ice and purified by ethanol precipitation. hTERT-RPE1 cells were maintained in DMEM-F12 with HEPES (Gibco) with 10% FBS (Gibco), 100 U/mL Pen/Strep (Gibco), 2 mM sodium pyruvate (Gibco), and MEM non-essential amino acids (Gibco) at 37 °C and 5% CO 2 .

    Article Title: Rapid, effective and low-cost purification of dideoxy-sequencing reactions by home-made magnetic beads suspension and magnetic separator.
    Article Snippet: Ethanol precipitation and BigDye XTerminator purification were conducted according to the manufacture’s protocols (Thermofisher).



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